JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF324B_chr19_58446622_58462833	0/0	g0063	1	1	0	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0064	1	0	1	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0065	1	0	1	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0066	1	0	0	0	0	1	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0067	1	0	1	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0068	1	1	0	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0069	1	1	0	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0070	1	0	1	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0071	1	0	0	1	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0072	1	1	0	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0073	1	0	0	0	1	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0074	1	0	0	1	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0075	1	0	0	1	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0076	1	0	0	1	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0077	1	0	0	1	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0078	1	0	1	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0079	1	0	1	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0080	1	1	0	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0081	1	1	0	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0082	1	1	0	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0083	1	0	0	1	0	0	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0084	1	0	0	0	0	1	ZNF324B	chr19	58446622	58462833
ZNF324B_chr19_58446622_58462833	0/0	g0085	1	1	0	0	0	0	ZNF324B	chr19	58446622	58462833
ZNF324_chr19_58462080_58480436	0/0	g0001	92	25	25	20	5	17	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0002	84	4	8	62	3	7	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0003	65	1	5	52	3	4	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0004	32	24	5	1	0	2	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0005	26	0	13	7	3	3	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0006	14	6	4	3	0	1	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/1	g0007	13	0	2	6	3	1	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	1/0	g0008	10	0	0	9	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0009	6	6	0	0	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0010	6	0	1	5	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0011	5	0	0	5	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0012	5	0	2	3	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0013	4	0	3	1	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0014	3	2	1	0	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0015	3	0	0	2	1	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0016	3	0	0	3	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0017	3	1	2	0	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0018	3	3	0	0	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0019	2	1	1	0	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0020	2	2	0	0	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0021	2	0	0	2	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0022	2	2	0	0	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0023	2	1	1	0	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0024	2	0	0	2	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0025	2	0	1	1	0	0	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0026	2	0	1	0	0	1	ZNF324	chr19	58462080	58480436
ZNF324_chr19_58462080_58480436	0/0	g0027	2	0	0	1	0	1	ZNF324	chr19	58462080	58480436