JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF32_chr10_43638862_43653881	0/0	g0023	1	0	0	0	0	1	ZNF32	chr10	43638862	43653881
ZNF32_chr10_43638862_43653881	0/0	g0024	1	1	0	0	0	0	ZNF32	chr10	43638862	43653881
ZNF32_chr10_43638862_43653881	0/0	g0025	1	0	0	0	0	1	ZNF32	chr10	43638862	43653881
ZNF32_chr10_43638862_43653881	0/0	g0026	1	0	0	0	0	1	ZNF32	chr10	43638862	43653881
ZNF32_chr10_43638862_43653881	0/0	g0027	1	1	0	0	0	0	ZNF32	chr10	43638862	43653881
ZNF32_chr10_43638862_43653881	0/0	g0028	1	0	0	1	0	0	ZNF32	chr10	43638862	43653881
ZNF32_chr10_43638862_43653881	0/0	g0029	1	1	0	0	0	0	ZNF32	chr10	43638862	43653881
ZNF32_chr10_43638862_43653881	0/0	g0030	1	0	0	1	0	0	ZNF32	chr10	43638862	43653881
ZNF32_chr10_43638862_43653881	0/0	g0031	1	1	0	0	0	0	ZNF32	chr10	43638862	43653881
ZNF32_chr10_43638862_43653881	0/0	g0032	1	0	0	1	0	0	ZNF32	chr10	43638862	43653881
ZNF330_chr4_141215895_141239697	0/0	g0001	90	7	13	58	2	10	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0002	72	3	17	35	6	11	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0003	53	5	17	26	2	3	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0004	12	10	2	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0005	12	11	1	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	1/1	g0006	6	1	2	0	1	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0007	5	0	0	5	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0008	5	5	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0009	4	3	1	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0010	4	3	1	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0011	4	0	0	4	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0012	3	3	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0013	3	3	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0014	3	3	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0015	3	3	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0016	3	3	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0017	3	0	0	3	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0018	2	0	0	2	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0019	2	0	1	0	1	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0020	2	0	0	0	0	2	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0021	2	0	0	0	2	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0022	2	0	0	0	1	1	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0023	2	2	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0024	2	2	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0025	2	2	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0026	2	0	0	2	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0027	2	2	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0028	2	2	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0029	2	0	0	2	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0030	2	0	2	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0031	2	1	1	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0032	1	0	1	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0033	1	1	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0034	1	1	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0035	1	1	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0036	1	0	0	1	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0037	1	0	0	0	0	1	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0038	1	1	0	0	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0039	1	0	0	1	0	0	ZNF330	chr4	141215895	141239697
ZNF330_chr4_141215895_141239697	0/0	g0040	1	0	0	0	0	1	ZNF330	chr4	141215895	141239697