JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF354C_chr5_179055373_179088977	0/0	g0214	1	0	0	1	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0215	1	1	0	0	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0216	1	0	1	0	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0217	1	1	0	0	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0218	1	1	0	0	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0219	1	0	0	1	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0220	1	0	0	1	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0221	1	0	0	0	0	1	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0222	1	0	0	1	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0223	1	0	0	1	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0224	1	0	0	1	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0225	1	1	0	0	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0226	1	1	0	0	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0227	1	1	0	0	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0228	1	1	0	0	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0229	1	1	0	0	0	0	ZNF354C	chr5	179055373	179088977
ZNF354C_chr5_179055373_179088977	0/0	g0230	1	1	0	0	0	0	ZNF354C	chr5	179055373	179088977
ZNF358_chr19_7511103_7526025	0/0	g0001	22	4	5	9	0	4	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0002	16	1	2	9	0	4	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0003	11	1	3	4	0	3	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/1	g0004	10	0	1	5	3	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0005	8	4	3	0	0	1	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0006	8	2	2	2	0	2	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0007	7	0	2	0	1	4	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0008	7	0	0	7	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0009	7	0	1	4	0	2	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0010	6	0	1	2	0	3	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0011	6	1	0	4	0	1	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0012	6	2	4	0	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0013	5	1	0	4	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0014	5	0	2	0	0	3	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0015	5	0	0	3	1	1	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0016	5	0	1	4	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0017	5	1	3	0	0	1	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	1/0	g0018	5	0	2	2	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0019	4	0	0	4	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0020	4	0	0	4	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0021	4	0	1	0	1	2	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0022	4	0	1	3	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0023	4	0	0	4	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0024	4	0	0	4	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0025	4	0	1	3	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0026	4	1	0	3	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0027	4	0	0	4	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0028	4	3	1	0	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0029	4	4	0	0	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0030	4	4	0	0	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0031	3	0	2	1	0	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0032	3	0	2	0	1	0	ZNF358	chr19	7511103	7526025
ZNF358_chr19_7511103_7526025	0/0	g0033	3	1	0	2	0	0	ZNF358	chr19	7511103	7526025