JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF384_chr12_6661477_6694375	0/0	g0175	1	0	0	1	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0176	1	1	0	0	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0177	1	0	0	1	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0178	1	0	0	1	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0179	1	0	0	1	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0180	1	0	0	1	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0181	1	1	0	0	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0182	1	0	1	0	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0183	1	1	0	0	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0184	1	1	0	0	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0185	1	1	0	0	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0186	1	1	0	0	0	0	ZNF384	chr12	6661477	6694375
ZNF384_chr12_6661477_6694375	0/0	g0187	1	0	1	0	0	0	ZNF384	chr12	6661477	6694375
ZNF385A_chr12_54364136_54389733	0/0	g0001	41	3	2	29	0	7	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0002	30	2	3	24	0	1	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0003	17	3	0	13	0	1	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0004	16	3	9	0	2	2	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/1	g0005	14	3	7	3	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0006	13	0	2	10	0	1	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0007	12	0	4	8	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0008	9	0	5	1	1	2	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0009	9	0	2	5	0	2	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0010	8	0	6	1	0	1	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0011	8	0	1	6	0	1	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0012	6	0	1	0	1	4	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0013	5	1	0	3	0	1	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0014	4	4	0	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0015	4	0	0	4	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0016	4	4	0	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0017	4	1	3	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0018	4	0	2	0	1	1	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0019	4	0	0	3	0	1	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0020	4	4	0	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0021	4	4	0	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0022	3	3	0	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0023	3	3	0	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0024	3	0	2	0	1	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0025	3	2	1	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0026	3	1	2	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0027	3	0	3	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0028	3	0	0	3	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0029	3	3	0	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0030	3	0	0	3	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0031	3	2	1	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0032	2	0	0	2	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0033	2	0	0	2	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0034	2	0	0	2	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0035	2	0	2	0	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0036	2	0	0	2	0	0	ZNF385A	chr12	54364136	54389733
ZNF385A_chr12_54364136_54389733	0/0	g0037	2	0	0	0	0	2	ZNF385A	chr12	54364136	54389733