JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF385D_chr3_21407218_21756210	0/0	g0248	1	0	1	0	0	0	ZNF385D	chr3	21407218	21756210
ZNF385D_chr3_21407218_21756210	0/0	g0249	1	1	0	0	0	0	ZNF385D	chr3	21407218	21756210
ZNF385D_chr3_21407218_21756210	0/0	g0250	1	0	1	0	0	0	ZNF385D	chr3	21407218	21756210
ZNF385D_chr3_21407218_21756210	0/0	g0251	1	0	1	0	0	0	ZNF385D	chr3	21407218	21756210
ZNF385D_chr3_21407218_21756210	0/0	g0252	1	0	1	0	0	0	ZNF385D	chr3	21407218	21756210
ZNF385D_chr3_21407218_21756210	0/0	g0253	1	1	0	0	0	0	ZNF385D	chr3	21407218	21756210
ZNF385D_chr3_21407218_21756210	0/0	g0254	1	1	0	0	0	0	ZNF385D	chr3	21407218	21756210
ZNF385D_chr3_21407218_21756210	0/0	g0255	1	0	1	0	0	0	ZNF385D	chr3	21407218	21756210
ZNF385D_chr3_21407218_21756210	0/0	g0256	1	0	1	0	0	0	ZNF385D	chr3	21407218	21756210
ZNF391_chr6_27383759_27408908	0/0	g0001	89	2	16	58	3	10	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0002	59	1	8	45	1	4	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0003	28	13	1	5	0	9	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0004	24	2	3	14	1	4	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0005	16	2	1	11	1	1	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0006	14	11	3	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0007	12	1	4	4	1	2	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0008	9	0	1	8	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0009	6	6	0	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0010	6	0	0	4	0	2	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0011	6	6	0	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0012	6	0	5	0	1	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0013	5	4	1	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0014	5	3	0	1	0	1	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0015	4	4	0	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0016	4	4	0	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0017	4	0	4	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0018	4	1	3	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0019	4	0	0	4	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0020	4	0	1	3	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0021	4	0	1	0	0	3	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0022	4	4	0	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0023	4	2	2	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	1/0	g0024	3	0	1	0	1	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0025	3	2	1	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0026	3	2	1	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0027	3	0	3	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0028	3	3	0	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0029	3	0	3	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0030	2	2	0	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0031	2	0	0	2	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0032	2	0	0	0	0	2	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0033	2	2	0	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0034	2	0	0	0	0	2	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0035	1	1	0	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0036	1	0	1	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0037	1	0	0	1	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0038	1	1	0	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0039	1	0	1	0	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0040	1	0	0	1	0	0	ZNF391	chr6	27383759	27408908
ZNF391_chr6_27383759_27408908	0/0	g0041	1	0	0	1	0	0	ZNF391	chr6	27383759	27408908