JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF398_chr7_149142453_149188042	0/0	g0254	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0255	1	0	1	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0256	1	0	1	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0257	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0258	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0259	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0260	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0261	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0262	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0263	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0264	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0265	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0266	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0267	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0268	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0269	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0270	1	0	0	1	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0271	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0272	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0273	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0274	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0275	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0276	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0277	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0278	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0279	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0280	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0281	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0282	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0283	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0284	1	1	0	0	0	0	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0285	1	0	0	0	0	1	ZNF398	chr7	149142453	149188042
ZNF398_chr7_149142453_149188042	0/0	g0286	1	0	1	0	0	0	ZNF398	chr7	149142453	149188042
ZNF3_chr7_100064973_100086723	0/0	g0001	75	3	11	43	5	13	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0002	75	9	19	32	1	14	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0003	39	3	10	21	2	3	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0004	15	1	2	9	0	3	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0005	13	0	0	12	1	0	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	1/0	g0006	12	11	0	0	0	0	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0007	10	0	0	10	0	0	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0008	10	7	3	0	0	0	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0009	9	2	2	0	4	1	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0010	9	0	0	9	0	0	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0011	8	0	0	8	0	0	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0012	8	8	0	0	0	0	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0013	6	0	2	0	1	3	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0014	6	0	1	5	0	0	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0015	6	0	0	6	0	0	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0016	5	0	4	0	1	0	ZNF3	chr7	100064973	100086723
ZNF3_chr7_100064973_100086723	0/0	g0017	5	1	3	0	0	1	ZNF3	chr7	100064973	100086723