JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF410_chr14_73881859_73937521	0/0	g0340	1	0	0	1	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0341	1	0	0	1	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0342	1	0	0	1	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0343	1	0	1	0	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0344	1	0	0	1	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0345	1	0	0	1	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0346	1	0	0	1	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0347	1	0	0	1	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0348	1	0	0	1	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0349	1	1	0	0	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0350	1	1	0	0	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0351	1	1	0	0	0	0	ZNF410	chr14	73881859	73937521
ZNF410_chr14_73881859_73937521	0/0	g0352	1	1	0	0	0	0	ZNF410	chr14	73881859	73937521
ZNF414_chr19_8504678_8519167	1/1	g0001	118	10	40	41	8	17	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0002	83	14	8	55	2	4	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0003	37	1	13	17	2	4	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0004	29	4	5	16	3	1	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0005	21	20	1	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0006	16	3	4	6	1	2	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0007	10	0	2	8	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0008	8	0	1	4	0	3	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0009	5	5	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0010	5	0	0	5	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0011	4	1	0	1	0	2	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0012	4	4	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0013	3	3	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0014	3	0	0	2	0	1	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0015	3	0	2	1	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0016	3	0	0	3	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0017	3	0	0	3	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0018	3	3	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0019	2	2	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0020	2	0	0	2	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0021	2	0	0	2	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0022	2	2	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0023	2	2	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0024	2	2	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0025	2	0	0	2	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0026	2	1	1	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0027	2	0	2	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0028	1	1	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0029	1	0	0	1	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0030	1	1	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0031	1	1	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0032	1	1	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0033	1	1	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0034	1	1	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0035	1	1	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0036	1	1	0	0	0	0	ZNF414	chr19	8504678	8519167
ZNF414_chr19_8504678_8519167	0/0	g0037	1	0	1	0	0	0	ZNF414	chr19	8504678	8519167