JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF417_chr19_57900774_57921592	0/0	g0207	1	1	0	0	0	0	ZNF417	chr19	57900774	57921592
ZNF417_chr19_57900774_57921592	0/0	g0208	1	1	0	0	0	0	ZNF417	chr19	57900774	57921592
ZNF417_chr19_57900774_57921592	0/0	g0209	1	0	1	0	0	0	ZNF417	chr19	57900774	57921592
ZNF417_chr19_57900774_57921592	0/0	g0210	1	0	0	1	0	0	ZNF417	chr19	57900774	57921592
ZNF418_chr19_57916882_57940402	1/0	g0001	68	0	13	39	4	11	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0002	56	10	10	32	1	3	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0003	39	2	11	22	2	2	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0004	25	0	3	22	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0005	21	2	5	9	2	3	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0006	12	12	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0007	9	9	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0008	6	0	4	0	1	1	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0009	6	6	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0010	6	0	4	0	1	1	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0011	5	5	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0012	5	0	0	5	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0013	5	0	1	4	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0014	4	0	3	1	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0015	4	0	0	4	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0016	4	4	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0017	4	0	0	4	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0018	3	3	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0019	3	3	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0020	3	3	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0021	3	0	2	0	1	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0022	3	0	0	0	0	3	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0023	2	2	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0024	2	0	0	2	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0025	2	2	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0026	2	2	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0027	2	0	0	0	0	2	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0028	2	0	0	2	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0029	2	0	2	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0030	2	2	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0031	2	2	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0032	2	2	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0033	2	0	0	0	0	2	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0034	2	1	1	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0035	2	0	0	2	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0036	2	0	2	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0037	2	2	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0038	2	2	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0039	2	0	0	2	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0040	2	0	0	1	1	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0041	2	0	0	1	0	1	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0042	2	0	1	1	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0043	2	0	0	2	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0044	1	1	0	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0045	1	0	1	0	0	0	ZNF418	chr19	57916882	57940402
ZNF418_chr19_57916882_57940402	0/0	g0046	1	1	0	0	0	0	ZNF418	chr19	57916882	57940402