JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF425_chr7_149097784_149131324	0/0	g0258	1	0	0	0	0	1	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0259	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0260	1	0	1	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0261	1	0	1	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0262	1	0	0	0	1	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0263	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0264	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0265	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0266	1	0	1	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0267	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0268	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0269	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0270	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0271	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0272	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0273	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0274	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0275	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0276	1	1	0	0	0	0	ZNF425	chr7	149097784	149131324
ZNF425_chr7_149097784_149131324	0/0	g0277	1	0	1	0	0	0	ZNF425	chr7	149097784	149131324
ZNF426_chr19_9518223_9543645	0/0	g0001	67	7	10	43	0	7	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0002	25	4	5	9	3	4	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/1	g0003	18	0	0	14	2	1	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0004	16	1	0	13	1	1	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0005	10	0	9	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0006	7	7	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0007	7	0	5	0	1	1	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0008	7	0	0	7	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0009	6	6	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0010	6	6	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0011	5	1	0	3	1	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0012	5	4	0	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0013	5	5	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0014	4	2	1	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0015	4	0	2	2	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0016	4	0	0	4	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0017	4	0	3	0	0	1	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0018	4	0	0	4	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0019	3	0	3	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0020	3	0	3	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0021	3	3	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0022	3	0	0	0	0	3	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0023	3	0	2	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0024	3	3	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0025	2	2	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0026	2	2	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0027	2	0	2	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0028	2	0	0	2	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0029	2	0	0	2	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0030	2	0	1	0	1	0	ZNF426	chr19	9518223	9543645