JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF426_chr19_9518223_9543645	0/0	g0181	1	0	0	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0182	1	0	0	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0183	1	0	1	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0184	1	0	0	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0185	1	0	0	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0186	1	1	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0187	1	0	0	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0188	1	0	1	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0189	1	0	1	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0190	1	0	1	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0191	1	0	1	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0192	1	0	0	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0193	1	0	0	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0194	1	0	0	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0195	1	1	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0196	1	0	0	0	0	1	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0197	1	0	0	0	0	1	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0198	1	1	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0199	1	0	0	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0200	1	0	0	0	0	1	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0201	1	0	0	1	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0202	1	1	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0203	1	1	0	0	0	0	ZNF426	chr19	9518223	9543645
ZNF426_chr19_9518223_9543645	0/0	g0204	1	0	0	0	0	1	ZNF426	chr19	9518223	9543645
ZNF428_chr19_43602224_43624629	0/0	g0001	45	6	7	26	0	6	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0002	43	2	14	20	2	5	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0003	43	1	7	27	3	5	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0004	13	7	0	4	0	2	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0005	11	1	3	0	3	4	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0006	10	0	2	8	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0007	10	0	0	7	1	2	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0008	9	1	1	5	0	2	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0009	9	1	2	5	0	1	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0010	7	5	1	0	0	1	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0011	7	6	0	1	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0012	6	1	1	2	1	1	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0013	5	0	0	5	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0014	5	4	1	0	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0015	5	0	4	1	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0016	5	5	0	0	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0017	4	0	3	0	1	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0018	4	4	0	0	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0019	4	1	0	3	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0020	4	0	0	4	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/1	g0021	3	0	2	0	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0022	3	0	3	0	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0023	3	1	2	0	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0024	3	0	1	2	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0025	2	0	0	2	0	0	ZNF428	chr19	43602224	43624629
ZNF428_chr19_43602224_43624629	0/0	g0026	2	0	0	2	0	0	ZNF428	chr19	43602224	43624629