JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF433_chr19_12009715_12040679	0/0	g0201	1	1	0	0	0	0	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0202	1	1	0	0	0	0	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0203	1	0	1	0	0	0	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0204	1	1	0	0	0	0	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0205	1	0	0	1	0	0	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0206	1	1	0	0	0	0	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0207	1	0	0	1	0	0	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0208	1	1	0	0	0	0	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0209	1	1	0	0	0	0	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0210	1	0	0	1	0	0	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0211	1	0	1	0	0	0	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0212	1	0	0	0	0	1	ZNF433	chr19	12009715	12040679
ZNF433_chr19_12009715_12040679	0/0	g0213	1	0	1	0	0	0	ZNF433	chr19	12009715	12040679
ZNF436_chr1_23354448_23374836	0/1	g0001	98	11	22	56	4	4	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0002	51	0	5	37	3	6	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	1/0	g0003	34	1	7	17	3	5	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0004	29	25	4	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0005	19	0	3	11	1	4	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0006	18	0	6	9	2	1	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0007	8	7	1	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0008	6	5	1	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0009	6	5	1	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0010	6	6	0	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0011	6	0	5	0	1	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0012	5	0	1	4	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0013	4	0	0	1	0	3	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0014	4	3	1	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0015	4	1	2	1	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0016	4	1	0	3	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0017	3	0	0	3	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0018	3	0	2	0	1	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0019	2	0	0	1	1	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0020	2	2	0	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0021	2	2	0	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0022	2	0	1	0	0	1	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0023	2	0	0	2	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0024	2	2	0	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0025	2	0	2	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0026	2	0	0	2	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0027	2	0	0	0	0	2	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0028	2	0	0	1	0	1	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0029	2	2	0	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0030	1	1	0	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0031	1	0	0	1	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0032	1	0	0	0	0	1	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0033	1	0	0	1	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0034	1	0	1	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0035	1	0	1	0	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0036	1	0	0	1	0	0	ZNF436	chr1	23354448	23374836
ZNF436_chr1_23354448_23374836	0/0	g0037	1	0	0	1	0	0	ZNF436	chr1	23354448	23374836