JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF442_chr19_12340944_12370683	0/0	g0179	1	0	0	1	0	0	ZNF442	chr19	12340944	12370683
ZNF442_chr19_12340944_12370683	0/0	g0180	1	0	0	1	0	0	ZNF442	chr19	12340944	12370683
ZNF442_chr19_12340944_12370683	0/0	g0181	1	1	0	0	0	0	ZNF442	chr19	12340944	12370683
ZNF442_chr19_12340944_12370683	0/0	g0182	1	0	0	1	0	0	ZNF442	chr19	12340944	12370683
ZNF442_chr19_12340944_12370683	0/0	g0183	1	1	0	0	0	0	ZNF442	chr19	12340944	12370683
ZNF442_chr19_12340944_12370683	0/0	g0184	1	1	0	0	0	0	ZNF442	chr19	12340944	12370683
ZNF442_chr19_12340944_12370683	0/0	g0185	1	0	0	1	0	0	ZNF442	chr19	12340944	12370683
ZNF442_chr19_12340944_12370683	0/0	g0186	1	1	0	0	0	0	ZNF442	chr19	12340944	12370683
ZNF442_chr19_12340944_12370683	0/0	g0187	1	1	0	0	0	0	ZNF442	chr19	12340944	12370683
ZNF443_chr19_12424706_12446021	0/1	g0001	68	0	10	53	1	3	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0002	55	13	9	24	1	8	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0003	31	6	0	24	0	1	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0004	22	2	11	3	4	2	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0005	12	0	0	12	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0006	12	0	0	12	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0007	10	5	4	1	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0008	9	8	1	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0009	6	0	2	2	1	1	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0010	5	0	1	0	0	4	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0011	5	0	0	5	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0012	5	5	0	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0013	5	4	1	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0014	4	4	0	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0015	4	4	0	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0016	3	0	2	0	1	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0017	3	0	1	2	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0018	3	0	0	3	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0019	3	3	0	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0020	3	0	0	0	0	3	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0021	3	0	0	3	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0022	3	3	0	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0023	3	0	0	0	0	3	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0024	3	0	0	3	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0025	2	2	0	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0026	2	0	0	2	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0027	2	0	0	2	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0028	2	0	1	0	0	1	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0029	2	2	0	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0030	2	0	0	2	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0031	2	2	0	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0032	2	2	0	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0033	2	0	0	2	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0034	2	0	2	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0035	2	0	2	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0036	2	0	1	0	1	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0037	2	1	1	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	1/0	g0038	2	0	0	1	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0039	2	2	0	0	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0040	2	0	1	1	0	0	ZNF443	chr19	12424706	12446021
ZNF443_chr19_12424706_12446021	0/0	g0041	2	0	0	2	0	0	ZNF443	chr19	12424706	12446021