JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF445_chr3_44426705_44482670	0/0	g0187	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0188	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0189	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0190	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0191	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0192	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0193	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0194	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0195	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0196	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0197	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0198	1	0	0	0	0	1	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0199	1	0	1	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0200	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0201	1	0	1	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0202	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0203	1	0	1	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0204	1	0	1	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0205	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0206	1	0	0	1	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0207	1	0	0	1	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0208	1	0	0	1	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0209	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0210	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0211	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0212	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0213	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0214	1	1	0	0	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0215	1	0	0	1	0	0	ZNF445	chr3	44426705	44482670
ZNF445_chr3_44426705_44482670	0/0	g0216	1	0	0	1	0	0	ZNF445	chr3	44426705	44482670
ZNF446_chr19_58471352_58486230	1/0	g0001	150	23	30	76	6	14	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0002	65	1	11	46	3	4	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/1	g0003	64	2	11	39	6	5	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0004	37	5	14	10	1	7	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0005	19	16	3	0	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0006	18	14	1	2	0	1	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0007	12	1	8	0	2	1	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0008	9	9	0	0	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0009	9	0	0	9	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0010	7	5	1	1	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0011	6	5	1	0	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0012	4	0	0	4	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0013	3	0	0	3	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0014	3	3	0	0	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0015	2	0	0	2	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0016	2	0	0	2	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0017	2	1	0	1	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0018	2	1	1	0	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0019	1	1	0	0	0	0	ZNF446	chr19	58471352	58486230
ZNF446_chr19_58471352_58486230	0/0	g0020	1	0	0	0	0	1	ZNF446	chr19	58471352	58486230