JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF462_chr9_106858166_107018634	0/0	g0168	1	0	0	1	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0169	1	0	0	1	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0170	1	1	0	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0171	1	0	1	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0172	1	0	1	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0173	1	0	0	1	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0174	1	1	0	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0175	1	0	0	1	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0176	1	0	1	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0177	1	0	0	1	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0178	1	1	0	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0179	1	0	1	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0180	1	0	1	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0181	1	0	0	1	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0182	1	0	0	1	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0183	1	0	0	1	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0184	1	1	0	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0185	1	0	0	1	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0186	1	1	0	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0187	1	0	0	1	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0188	1	1	0	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/1	g0189	1	0	0	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0190	1	0	1	0	0	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0191	1	0	0	0	1	0	ZNF462	chr9	106858166	107018634
ZNF462_chr9_106858166_107018634	0/0	g0192	1	0	0	1	0	0	ZNF462	chr9	106858166	107018634
ZNF467_chr7_149759182_149778588	0/0	g0001	117	8	30	59	6	14	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	1/0	g0002	37	2	11	10	3	10	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0003	26	1	6	18	0	1	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0004	18	1	0	12	1	4	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0005	14	1	1	8	2	2	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0006	10	10	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0007	6	0	0	6	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0008	6	1	2	3	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0009	6	6	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0010	5	5	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0011	5	0	0	5	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0012	4	3	1	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0013	4	4	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/1	g0014	4	0	2	0	1	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0015	4	4	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0016	4	0	4	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0017	4	0	0	0	2	2	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0018	4	0	4	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0019	4	4	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0020	4	0	1	2	0	1	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0021	3	0	0	3	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0022	3	0	0	3	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0023	3	3	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0024	3	3	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0025	3	3	0	0	0	0	ZNF467	chr7	149759182	149778588