JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF467_chr7_149759182_149778588	0/0	g0076	1	0	1	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0077	1	0	0	0	0	1	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0078	1	0	0	1	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0079	1	0	1	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0080	1	0	1	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0081	1	1	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0082	1	0	0	0	0	1	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0083	1	0	0	0	0	1	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0084	1	0	0	1	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0085	1	0	0	1	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0086	1	0	1	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0087	1	0	0	0	1	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0088	1	0	0	1	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0089	1	0	0	1	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0090	1	0	0	1	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0091	1	1	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0092	1	1	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0093	1	1	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0094	1	1	0	0	0	0	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0095	1	0	0	0	0	1	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0096	1	0	0	0	0	1	ZNF467	chr7	149759182	149778588
ZNF467_chr7_149759182_149778588	0/0	g0097	1	0	0	1	0	0	ZNF467	chr7	149759182	149778588
ZNF468_chr19_52833010_52862619	1/0	g0001	22	0	3	16	0	2	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0002	15	1	0	12	0	2	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0003	10	0	8	0	1	1	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0004	7	0	0	6	0	1	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0005	7	0	6	0	0	1	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0006	7	0	0	7	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0007	6	0	0	6	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0008	6	0	0	5	0	1	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0009	5	0	1	0	0	4	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0010	5	0	3	0	1	1	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0011	5	0	3	2	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0012	4	0	0	2	0	2	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0013	4	0	0	4	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0014	4	0	0	0	0	4	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0015	4	0	4	0	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0016	4	4	0	0	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0017	3	1	1	0	0	1	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0018	3	3	0	0	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0019	3	3	0	0	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0020	3	3	0	0	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0021	3	0	1	0	1	1	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0022	3	0	0	3	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0023	3	0	0	3	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0024	3	0	0	3	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0025	3	0	0	3	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0026	3	0	0	3	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0027	3	0	0	3	0	0	ZNF468	chr19	52833010	52862619
ZNF468_chr19_52833010_52862619	0/0	g0028	3	3	0	0	0	0	ZNF468	chr19	52833010	52862619