JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF469_chr16_88377959_88445753	0/0	g0305	1	0	1	0	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0306	1	0	0	0	0	1	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0307	1	0	0	0	0	1	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0308	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0309	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0310	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0311	1	1	0	0	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0312	1	0	0	0	0	1	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0313	1	1	0	0	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0314	1	0	1	0	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0315	1	0	1	0	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0316	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0317	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0318	1	0	1	0	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0319	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0320	1	1	0	0	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0321	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0322	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0323	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0324	1	0	1	0	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0325	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0326	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0327	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0328	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0329	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0330	1	0	0	1	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0331	1	0	1	0	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0332	1	0	1	0	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0333	1	0	1	0	0	0	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	g0334	1	0	1	0	0	0	ZNF469	chr16	88377959	88445753
ZNF470_chr19_56562468_56587894	1/0	g0001	30	1	6	19	2	1	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0002	17	0	5	10	1	1	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0003	14	0	2	9	0	3	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0004	12	1	5	3	1	2	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0005	9	0	0	8	0	1	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0006	8	4	0	3	0	1	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0007	8	0	3	4	1	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0008	8	0	0	8	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0009	7	2	1	3	1	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0010	7	6	1	0	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0011	6	0	2	2	0	2	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0012	6	0	2	1	0	3	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0013	5	2	0	3	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0014	5	0	2	1	0	2	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0015	5	0	1	4	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0016	5	0	3	0	0	2	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0017	5	0	0	5	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0018	5	0	0	5	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0019	4	1	0	3	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0020	4	0	0	4	0	0	ZNF470	chr19	56562468	56587894