JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF470_chr19_56562468_56587894	0/0	g0221	1	0	0	1	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0222	1	0	0	1	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0223	1	0	0	0	0	1	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0224	1	0	1	0	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0225	1	0	0	0	0	1	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0226	1	0	0	1	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0227	1	0	0	0	0	1	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0228	1	0	0	0	0	1	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0229	1	0	1	0	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0230	1	0	0	1	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0231	1	0	0	0	1	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0232	1	0	0	0	0	1	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0233	1	0	0	0	0	1	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0234	1	0	0	0	1	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0235	1	0	0	1	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0236	1	0	0	1	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0237	1	0	0	1	0	0	ZNF470	chr19	56562468	56587894
ZNF470_chr19_56562468_56587894	0/0	g0238	1	0	0	1	0	0	ZNF470	chr19	56562468	56587894
ZNF471_chr19_56502855_56535212	0/0	g0001	27	0	7	20	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	1/0	g0002	24	0	3	13	1	6	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0003	20	7	3	5	2	3	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0004	13	3	0	8	0	2	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0005	8	8	0	0	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/1	g0006	8	0	5	0	0	2	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0007	8	0	1	7	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0008	6	4	0	2	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0009	6	4	1	0	0	1	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0010	4	0	1	3	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0011	4	0	0	4	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0012	4	0	0	4	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0013	4	0	2	2	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0014	4	0	0	4	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0015	3	0	0	3	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0016	3	0	0	2	0	1	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0017	3	0	0	3	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0018	3	0	0	3	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0019	3	0	0	3	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0020	3	0	2	0	0	1	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0021	3	0	1	1	0	1	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0022	3	0	3	0	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0023	3	0	1	2	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0024	3	0	0	3	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0025	3	0	0	3	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0026	2	0	0	2	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0027	2	2	0	0	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0028	2	2	0	0	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0029	2	0	0	2	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0030	2	0	0	2	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0031	2	0	0	2	0	0	ZNF471	chr19	56502855	56535212
ZNF471_chr19_56502855_56535212	0/0	g0032	2	2	0	0	0	0	ZNF471	chr19	56502855	56535212