JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF484_chr9_92839182_92883038	0/0	g0198	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0199	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0200	1	1	0	0	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0201	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0202	1	0	1	0	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0203	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0204	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0205	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0206	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0207	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0208	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0209	1	1	0	0	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0210	1	0	1	0	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0211	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0212	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0213	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0214	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0215	1	0	1	0	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0216	1	1	0	0	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0217	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0218	1	0	1	0	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0219	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0220	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0221	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0222	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0223	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0224	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0225	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0226	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0227	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0228	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0229	1	0	0	1	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0230	1	0	0	0	1	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0231	1	1	0	0	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0232	1	1	0	0	0	0	ZNF484	chr9	92839182	92883038
ZNF484_chr9_92839182_92883038	0/0	g0233	1	1	0	0	0	0	ZNF484	chr9	92839182	92883038
ZNF485_chr10_43601438_43622904	0/0	g0001	83	8	17	51	0	7	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0002	83	2	2	73	2	4	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0003	59	0	12	37	0	10	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/1	g0004	29	18	8	0	2	0	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0005	15	13	2	0	0	0	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0006	14	4	3	1	2	4	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0007	10	0	1	9	0	0	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0008	9	0	2	0	2	5	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0009	9	0	0	9	0	0	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0010	7	0	6	0	1	0	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0011	7	5	1	0	0	1	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0012	6	0	6	0	0	0	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0013	5	4	1	0	0	0	ZNF485	chr10	43601438	43622904
ZNF485_chr10_43601438_43622904	0/0	g0014	5	0	1	0	1	3	ZNF485	chr10	43601438	43622904