JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF490_chr19_12571100_12615813	0/0	g0332	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0333	1	1	0	0	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0334	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0335	1	1	0	0	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0336	1	1	0	0	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0337	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0338	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0339	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0340	1	1	0	0	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0341	1	0	1	0	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0342	1	1	0	0	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0343	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0344	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0345	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0346	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0347	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0348	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0349	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0350	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0351	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0352	1	1	0	0	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0353	1	1	0	0	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0354	1	0	1	0	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0355	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0356	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0357	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0358	1	1	0	0	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0359	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF490_chr19_12571100_12615813	0/0	g0360	1	0	0	1	0	0	ZNF490	chr19	12571100	12615813
ZNF491_chr19_11793523_11813503	0/0	g0001	90	4	24	49	5	8	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0002	47	11	7	28	0	1	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0003	37	22	7	3	1	4	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0004	16	2	8	0	4	2	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0005	13	0	3	10	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0006	10	1	5	2	2	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0007	8	0	1	7	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0008	7	1	1	5	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0009	6	0	0	6	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0010	6	0	0	6	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0011	5	1	0	3	0	1	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0012	5	0	0	4	0	1	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0013	5	5	0	0	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0014	4	1	0	3	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0015	4	0	0	4	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0016	4	4	0	0	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0017	3	2	1	0	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0018	3	3	0	0	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0019	3	1	0	1	0	1	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0020	3	0	0	3	0	0	ZNF491	chr19	11793523	11813503
ZNF491_chr19_11793523_11813503	0/0	g0021	3	0	1	2	0	0	ZNF491	chr19	11793523	11813503