JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF492_chr19_22629324_22672671	0/0	g0267	1	0	0	0	0	1	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0268	1	0	0	1	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0269	1	0	0	1	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0270	1	0	0	1	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0271	1	0	0	1	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0272	1	0	1	0	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0273	1	0	0	1	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0274	1	1	0	0	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0275	1	1	0	0	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0276	1	1	0	0	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0277	1	1	0	0	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0278	1	0	1	0	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0279	1	0	0	1	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0280	1	0	0	0	1	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0281	1	0	0	0	0	1	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0282	1	0	0	1	0	0	ZNF492	chr19	22629324	22672671
ZNF492_chr19_22629324_22672671	0/0	g0283	1	0	0	1	0	0	ZNF492	chr19	22629324	22672671
ZNF493_chr19_21392133_21432577	0/0	g0001	4	1	2	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0002	3	0	2	0	0	1	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/1	g0003	3	0	2	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0004	2	0	0	2	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0005	2	0	1	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0006	2	0	0	0	2	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0007	2	0	0	0	0	2	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0008	2	0	0	2	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0009	2	0	0	2	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0010	2	0	2	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0011	2	1	1	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0012	2	0	2	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0013	2	0	0	2	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	1/0	g0014	2	0	0	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0015	1	1	0	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0016	1	0	1	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0017	1	0	0	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0018	1	0	0	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0019	1	0	0	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0020	1	0	0	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0021	1	0	0	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0022	1	0	0	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0023	1	0	0	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0024	1	0	0	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0025	1	0	0	0	0	1	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0026	1	0	0	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0027	1	1	0	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0028	1	1	0	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0029	1	0	0	0	0	1	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0030	1	0	1	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0031	1	0	0	0	1	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0032	1	0	1	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0033	1	0	0	1	0	0	ZNF493	chr19	21392133	21432577