JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF493_chr19_21392133_21432577	0/0	g0334	1	0	1	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0335	1	0	1	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0336	1	1	0	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0337	1	1	0	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0338	1	1	0	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0339	1	1	0	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0340	1	1	0	0	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0341	1	0	0	1	0	0	ZNF493	chr19	21392133	21432577
ZNF493_chr19_21392133_21432577	0/0	g0342	1	1	0	0	0	0	ZNF493	chr19	21392133	21432577
ZNF496_chr1_247292415_247336867	0/0	g0001	13	0	2	9	0	2	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0002	11	1	1	7	0	2	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0003	5	3	2	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0004	5	1	4	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0005	4	0	0	4	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0006	4	0	0	0	0	4	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0007	4	3	1	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0008	4	0	3	0	1	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0009	4	3	1	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0010	3	0	2	1	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0011	3	0	0	3	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0012	3	0	2	0	0	1	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0013	3	0	0	2	0	1	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0014	3	0	0	3	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0015	3	0	0	3	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0016	3	0	1	2	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0017	3	3	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0018	2	0	0	1	1	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0019	2	0	0	2	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0020	2	0	1	1	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0021	2	0	0	2	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0022	2	0	1	0	0	1	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0023	2	0	0	0	0	2	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0024	2	0	0	2	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0025	2	1	1	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0026	2	0	0	2	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0027	2	0	2	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0028	2	0	0	2	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0029	2	0	0	0	0	2	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0030	2	2	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0031	2	2	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0032	2	0	0	0	0	2	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0033	2	0	2	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0034	2	2	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/1	g0035	2	0	1	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0036	2	0	1	0	1	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0037	2	0	0	0	0	2	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0038	2	2	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0039	1	0	0	0	0	1	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0040	1	0	1	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0041	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867