JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF496_chr1_247292415_247336867	0/0	g0242	1	0	0	1	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0243	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0244	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0245	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0246	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0247	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0248	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0249	1	0	1	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0250	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0251	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0252	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0253	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	1/0	g0254	1	0	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0255	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0256	1	0	1	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0257	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0258	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0259	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0260	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0261	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0262	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0263	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0264	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0265	1	0	1	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0266	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0267	1	0	1	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0268	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0269	1	1	0	0	0	0	ZNF496	chr1	247292415	247336867
ZNF496_chr1_247292415_247336867	0/0	g0270	1	0	0	1	0	0	ZNF496	chr1	247292415	247336867
ZNF497_chr19_58349357_58367751	0/0	g0001	57	6	8	39	1	3	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0002	36	0	7	24	2	3	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0003	34	3	11	5	2	13	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0004	24	0	6	16	0	2	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	1/0	g0005	16	1	2	9	2	1	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0006	15	0	0	15	0	0	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0007	14	5	5	3	0	1	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0008	8	1	7	0	0	0	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0009	8	5	3	0	0	0	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0010	5	0	3	1	0	1	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0011	5	0	3	1	1	0	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0012	5	0	1	2	1	1	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0013	4	0	4	0	0	0	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0014	4	0	0	4	0	0	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0015	4	2	0	2	0	0	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0016	4	0	0	4	0	0	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0017	4	0	2	2	0	0	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0018	4	4	0	0	0	0	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0019	4	1	0	1	0	2	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0020	4	4	0	0	0	0	ZNF497	chr19	58349357	58367751
ZNF497_chr19_58349357_58367751	0/0	g0021	3	1	0	0	1	1	ZNF497	chr19	58349357	58367751