JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF501_chr3_44724635_44742083	0/1	g0001	171	18	39	77	8	28	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	1/0	g0002	91	31	18	26	3	12	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0003	29	23	4	1	1	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0004	12	0	6	5	1	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0005	11	5	3	3	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0006	5	5	0	0	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0007	5	5	0	0	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0008	3	3	0	0	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0009	3	0	1	0	2	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0010	2	2	0	0	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0011	2	0	0	0	0	2	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0012	2	0	0	2	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0013	2	0	0	2	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0014	2	0	0	0	0	2	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0015	1	1	0	0	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0016	1	0	1	0	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0017	1	0	0	0	1	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0018	1	1	0	0	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0019	1	1	0	0	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0020	1	1	0	0	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0021	1	1	0	0	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0022	1	1	0	0	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0023	1	0	0	1	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0024	1	0	0	1	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0025	1	0	0	1	0	0	ZNF501	chr3	44724635	44742083
ZNF501_chr3_44724635_44742083	0/0	g0026	1	0	0	1	0	0	ZNF501	chr3	44724635	44742083
ZNF502_chr3_44707660_44728831	0/1	g0001	149	16	33	68	6	25	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0002	68	22	14	17	3	12	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0003	16	0	8	7	1	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0004	10	10	0	0	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0005	8	0	2	6	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0006	6	6	0	0	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0007	6	5	1	0	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0008	6	6	0	0	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0009	6	1	5	0	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0010	5	0	2	3	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0011	4	0	0	4	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0012	4	3	0	1	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0013	3	2	1	0	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0014	3	0	0	3	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0015	3	3	0	0	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0016	2	0	0	0	2	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	1/0	g0017	2	0	1	0	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0018	2	2	0	0	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0019	2	0	2	0	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0020	2	0	0	0	2	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0021	2	0	0	2	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0022	2	2	0	0	0	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0023	2	1	0	0	1	0	ZNF502	chr3	44707660	44728831
ZNF502_chr3_44707660_44728831	0/0	g0024	2	2	0	0	0	0	ZNF502	chr3	44707660	44728831