JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF507_chr19_32340610_32392667	0/0	g0298	1	0	0	1	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0299	1	0	0	0	0	1	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0300	1	0	0	0	1	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0301	1	0	1	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0302	1	0	0	1	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0303	1	0	1	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0304	1	0	1	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0305	1	0	0	0	0	1	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0306	1	0	1	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0307	1	1	0	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0308	1	0	0	0	0	1	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0309	1	0	1	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0310	1	0	1	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0311	1	0	0	0	0	1	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0312	1	0	0	1	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0313	1	0	1	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0314	1	0	0	0	0	1	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0315	1	0	0	0	0	1	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0316	1	0	0	0	0	1	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0317	1	0	0	1	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0318	1	0	0	1	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0319	1	0	0	1	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0320	1	1	0	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0321	1	1	0	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0322	1	1	0	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0323	1	1	0	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0324	1	1	0	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0325	1	0	1	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0326	1	1	0	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0327	1	1	0	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0328	1	1	0	0	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0329	1	0	0	1	0	0	ZNF507	chr19	32340610	32392667
ZNF507_chr19_32340610_32392667	0/0	g0330	1	1	0	0	0	0	ZNF507	chr19	32340610	32392667
ZNF510_chr9_96749553_96783087	0/0	g0001	32	0	0	31	0	1	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	1/0	g0002	28	2	5	17	1	2	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0003	25	2	7	13	0	3	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0004	12	0	0	11	0	1	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/1	g0005	11	1	3	2	1	3	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0006	8	8	0	0	0	0	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0007	6	0	1	5	0	0	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0008	6	0	3	3	0	0	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0009	5	5	0	0	0	0	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0010	5	3	2	0	0	0	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0011	4	3	1	0	0	0	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0012	4	4	0	0	0	0	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0013	4	4	0	0	0	0	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0014	4	0	1	3	0	0	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0015	4	0	0	4	0	0	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0016	3	2	1	0	0	0	ZNF510	chr9	96749553	96783087
ZNF510_chr9_96749553_96783087	0/0	g0017	3	3	0	0	0	0	ZNF510	chr9	96749553	96783087