JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF513_chr2_27372235_27385734	0/0	g0016	1	0	0	1	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0017	1	0	1	0	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0018	1	1	0	0	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0019	1	0	1	0	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0020	1	1	0	0	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0021	1	0	1	0	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0022	1	1	0	0	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0023	1	0	0	1	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0024	1	1	0	0	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0025	1	1	0	0	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0026	1	1	0	0	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0027	1	0	0	1	0	0	ZNF513	chr2	27372235	27385734
ZNF513_chr2_27372235_27385734	0/0	g0028	1	0	1	0	0	0	ZNF513	chr2	27372235	27385734
ZNF514_chr2_95140000_95164848	0/0	g0001	32	0	2	27	0	3	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0002	21	16	2	1	1	1	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0003	20	0	12	5	0	3	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0004	18	0	0	13	0	5	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/1	g0005	17	2	1	11	0	2	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0006	13	2	1	7	1	2	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0007	8	0	6	0	0	2	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0008	8	7	1	0	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0009	6	0	1	5	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0010	6	0	1	5	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0011	6	0	0	5	1	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0012	5	0	0	5	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0013	5	0	0	2	1	2	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0014	5	0	1	3	0	1	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0015	5	4	0	1	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0016	5	0	1	4	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0017	4	2	2	0	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0018	4	0	1	3	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0019	4	0	0	3	0	1	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0020	4	0	3	0	0	1	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0021	4	0	0	4	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0022	4	0	3	1	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0023	3	0	0	2	0	1	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0024	3	0	2	0	1	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0025	3	0	2	0	1	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0026	3	1	1	1	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0027	3	0	0	0	2	1	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0028	3	0	0	2	0	1	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0029	3	0	1	2	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0030	2	2	0	0	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0031	2	2	0	0	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0032	2	2	0	0	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0033	2	0	0	1	0	1	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0034	2	1	1	0	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0035	2	2	0	0	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0036	2	0	0	2	0	0	ZNF514	chr2	95140000	95164848
ZNF514_chr2_95140000_95164848	0/0	g0037	2	0	1	1	0	0	ZNF514	chr2	95140000	95164848