JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF517_chr8_144793913_144815084	0/0	g0039	1	0	0	1	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0040	1	0	0	1	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0041	1	0	1	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0042	1	0	0	1	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0043	1	0	0	1	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0044	1	0	1	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0045	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0046	1	0	1	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0047	1	0	1	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0048	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0049	1	0	0	1	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0050	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0051	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0052	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0053	1	0	1	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0054	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0055	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0056	1	0	0	1	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0057	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0058	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0059	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0060	1	0	0	0	0	1	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	1/0	g0061	1	0	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0062	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0063	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0064	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0065	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0066	1	0	0	0	0	1	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0067	1	0	0	0	0	1	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0068	1	0	0	0	0	1	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0069	1	0	0	1	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0070	1	0	0	1	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0071	1	0	0	0	0	1	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0072	1	0	0	0	0	1	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0073	1	0	0	0	0	1	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0074	1	0	1	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0075	1	0	0	1	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0076	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0077	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0078	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0079	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF517_chr8_144793913_144815084	0/0	g0080	1	1	0	0	0	0	ZNF517	chr8	144793913	144815084
ZNF518A_chr10_96125297_96168759	0/0	g0001	19	0	0	18	0	1	ZNF518A	chr10	96125297	96168759
ZNF518A_chr10_96125297_96168759	0/0	g0002	8	0	1	7	0	0	ZNF518A	chr10	96125297	96168759
ZNF518A_chr10_96125297_96168759	0/0	g0003	8	0	0	7	0	1	ZNF518A	chr10	96125297	96168759
ZNF518A_chr10_96125297_96168759	0/0	g0004	8	0	5	0	1	2	ZNF518A	chr10	96125297	96168759
ZNF518A_chr10_96125297_96168759	0/0	g0005	8	0	0	8	0	0	ZNF518A	chr10	96125297	96168759
ZNF518A_chr10_96125297_96168759	0/0	g0006	5	1	0	3	0	1	ZNF518A	chr10	96125297	96168759
ZNF518A_chr10_96125297_96168759	0/0	g0007	5	0	0	4	0	1	ZNF518A	chr10	96125297	96168759
ZNF518A_chr10_96125297_96168759	0/0	g0008	5	5	0	0	0	0	ZNF518A	chr10	96125297	96168759