JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF521_chr18_25056924_25357166	0/0	g0216	1	0	1	0	0	0	ZNF521	chr18	25056924	25357166
ZNF524_chr19_55595288_55608138	0/1	g0001	227	29	50	97	13	37	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0002	75	12	7	51	3	2	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	1/0	g0003	61	24	14	18	0	4	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0004	26	11	9	1	0	5	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0005	6	5	1	0	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0006	5	0	4	0	1	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0007	4	1	1	2	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0008	3	3	0	0	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0009	2	0	2	0	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0010	2	1	0	1	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0011	2	2	0	0	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0012	2	2	0	0	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0013	2	2	0	0	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0014	1	1	0	0	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0015	1	0	0	1	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0016	1	0	0	1	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0017	1	1	0	0	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0018	1	0	0	1	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0019	1	0	0	1	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0020	1	0	0	0	1	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0021	1	1	0	0	0	0	ZNF524	chr19	55595288	55608138
ZNF524_chr19_55595288_55608138	0/0	g0022	1	1	0	0	0	0	ZNF524	chr19	55595288	55608138
ZNF525_chr19_53360705_53391590	0/0	g0001	22	4	2	16	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0002	13	2	6	1	1	3	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0003	12	0	0	12	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0004	9	0	0	9	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0005	8	0	7	0	0	1	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0006	6	0	3	3	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0007	6	0	0	6	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0008	6	0	0	1	0	5	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0009	5	0	3	0	0	2	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0010	5	5	0	0	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0011	5	0	5	0	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0012	5	0	0	5	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0013	4	4	0	0	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0014	4	0	2	2	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0015	4	1	0	1	2	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0016	4	0	3	1	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0017	3	0	2	0	1	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0018	3	3	0	0	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0019	3	3	0	0	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0020	3	0	3	0	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0021	3	0	2	0	0	1	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0022	3	0	1	0	1	1	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0023	3	0	0	3	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0024	3	3	0	0	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0025	3	0	0	2	0	1	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0026	3	0	0	3	0	0	ZNF525	chr19	53360705	53391590
ZNF525_chr19_53360705_53391590	0/0	g0027	3	0	0	0	2	1	ZNF525	chr19	53360705	53391590