JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF570_chr19_37464356_37493652	0/0	g0220	1	0	0	1	0	0	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0221	1	0	1	0	0	0	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0222	1	0	1	0	0	0	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0223	1	0	0	0	0	1	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0224	1	0	0	1	0	0	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0225	1	0	1	0	0	0	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0226	1	0	0	1	0	0	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0227	1	1	0	0	0	0	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0228	1	0	1	0	0	0	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0229	1	0	0	0	0	1	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0230	1	0	0	1	0	0	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0231	1	0	1	0	0	0	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0232	1	0	0	1	0	0	ZNF570	chr19	37464356	37493652
ZNF570_chr19_37464356_37493652	0/0	g0233	1	0	0	1	0	0	ZNF570	chr19	37464356	37493652
ZNF571_chr19_37559260_37599792	0/0	g0001	24	6	3	12	0	3	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0002	11	1	9	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0003	11	1	1	9	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0004	9	5	3	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0005	7	1	1	4	0	1	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0006	6	6	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0007	6	0	1	5	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0008	5	0	3	2	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0009	5	0	0	5	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0010	4	0	1	3	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0011	4	0	4	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0012	4	0	1	2	1	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0013	3	3	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0014	3	3	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0015	3	0	0	1	0	2	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0016	3	0	0	0	3	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0017	3	1	1	0	0	1	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0018	3	1	0	1	0	1	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0019	3	0	0	3	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0020	3	3	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0021	3	0	0	2	0	1	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0022	3	0	0	3	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0023	2	0	2	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0024	2	1	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0025	2	1	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0026	2	0	0	2	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0027	2	0	0	2	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0028	2	0	0	2	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0029	2	0	0	2	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0030	2	0	1	0	0	1	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0031	2	2	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0032	2	0	0	0	0	2	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0033	2	0	0	2	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0034	2	0	0	2	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0035	2	0	0	2	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0036	2	2	0	0	0	0	ZNF571	chr19	37559260	37599792