JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF571_chr19_37559260_37599792	0/0	g0187	1	1	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0188	1	0	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0189	1	0	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0190	1	0	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0191	1	0	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0192	1	1	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0193	1	0	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0194	1	1	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0195	1	0	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0196	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0197	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0198	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0199	1	0	0	0	0	1	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0200	1	0	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0201	1	0	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0202	1	0	0	0	0	1	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0203	1	0	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0204	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0205	1	0	0	0	0	1	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0206	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0207	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0208	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0209	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0210	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0211	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0212	1	0	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0213	1	0	0	0	0	1	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	1/0	g0214	1	0	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0215	1	0	0	1	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0216	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0217	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0218	1	0	0	0	1	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0219	1	0	1	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0220	1	1	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0221	1	1	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF571_chr19_37559260_37599792	0/0	g0222	1	1	0	0	0	0	ZNF571	chr19	37559260	37599792
ZNF572_chr8_124968295_124984389	1/1	g0001	360	72	60	179	10	37	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0002	12	11	0	0	0	1	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0003	3	3	0	0	0	0	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0004	2	2	0	0	0	0	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0005	2	2	0	0	0	0	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0006	1	1	0	0	0	0	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0007	1	1	0	0	0	0	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0008	1	0	0	1	0	0	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0009	1	0	0	1	0	0	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0010	1	1	0	0	0	0	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0011	1	1	0	0	0	0	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0012	1	0	1	0	0	0	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0013	1	0	0	1	0	0	ZNF572	chr8	124968295	124984389
ZNF572_chr8_124968295_124984389	0/0	g0014	1	0	1	0	0	0	ZNF572	chr8	124968295	124984389