JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF573_chr19_37733302_37784586	0/0	g0301	1	1	0	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0302	1	1	0	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0303	1	0	1	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0304	1	0	1	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	1/0	g0305	1	0	0	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0306	1	0	0	1	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0307	1	0	0	1	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0308	1	0	1	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0309	1	0	0	0	0	1	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0310	1	1	0	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0311	1	1	0	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0312	1	0	0	1	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0313	1	0	1	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0314	1	1	0	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0315	1	0	0	1	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0316	1	0	0	1	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0317	1	0	0	1	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0318	1	0	1	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0319	1	0	0	1	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0320	1	0	0	1	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0321	1	0	1	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0322	1	0	1	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0323	1	0	0	1	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0324	1	0	0	1	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0325	1	0	1	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0326	1	0	0	0	1	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0327	1	0	1	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0328	1	0	0	0	0	1	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0329	1	0	1	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0330	1	1	0	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0331	1	1	0	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0332	1	0	0	1	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0333	1	0	1	0	0	0	ZNF573	chr19	37733302	37784586
ZNF573_chr19_37733302_37784586	0/0	g0334	1	1	0	0	0	0	ZNF573	chr19	37733302	37784586
ZNF574_chr19_42071166_42086552	1/0	g0001	307	68	66	127	9	36	ZNF574	chr19	42071166	42086552
ZNF574_chr19_42071166_42086552	0/0	g0002	22	21	0	0	0	1	ZNF574	chr19	42071166	42086552
ZNF574_chr19_42071166_42086552	0/0	g0003	3	0	0	3	0	0	ZNF574	chr19	42071166	42086552
ZNF574_chr19_42071166_42086552	0/0	g0004	1	1	0	0	0	0	ZNF574	chr19	42071166	42086552
ZNF574_chr19_42071166_42086552	0/0	g0005	1	1	0	0	0	0	ZNF574	chr19	42071166	42086552
ZNF574_chr19_42071166_42086552	0/0	g0006	1	0	0	1	0	0	ZNF574	chr19	42071166	42086552
ZNF574_chr19_42071166_42086552	0/0	g0007	1	1	0	0	0	0	ZNF574	chr19	42071166	42086552
ZNF574_chr19_42071166_42086552	0/0	g0008	1	0	0	0	1	0	ZNF574	chr19	42071166	42086552
ZNF574_chr19_42071166_42086552	0/0	g0009	1	0	0	1	0	0	ZNF574	chr19	42071166	42086552
ZNF574_chr19_42071166_42086552	0/1	g0010	1	0	0	0	0	0	ZNF574	chr19	42071166	42086552
ZNF574_chr19_42071166_42086552	0/0	g0011	1	0	0	0	0	1	ZNF574	chr19	42071166	42086552
ZNF575_chr19_43528188_43541087	0/1	g0001	211	39	41	94	13	23	ZNF575	chr19	43528188	43541087
ZNF575_chr19_43528188_43541087	1/0	g0002	102	12	23	47	3	16	ZNF575	chr19	43528188	43541087
ZNF575_chr19_43528188_43541087	0/0	g0003	78	5	12	54	0	7	ZNF575	chr19	43528188	43541087
ZNF575_chr19_43528188_43541087	0/0	g0004	8	7	1	0	0	0	ZNF575	chr19	43528188	43541087
ZNF575_chr19_43528188_43541087	0/0	g0005	7	7	0	0	0	0	ZNF575	chr19	43528188	43541087