JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF578_chr19_52448553_52521882	0/0	g0336	1	0	0	1	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0337	1	0	0	0	1	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0338	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0339	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0340	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0341	1	1	0	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0342	1	0	0	0	0	1	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0343	1	0	0	0	0	1	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0344	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0345	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0346	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0347	1	0	0	0	0	1	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0348	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0349	1	1	0	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0350	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0351	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0352	1	1	0	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0353	1	0	0	1	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0354	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0355	1	0	0	1	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0356	1	1	0	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0357	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0358	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0359	1	0	0	0	0	1	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0360	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0361	1	1	0	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0362	1	1	0	0	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0363	1	0	0	0	0	1	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0364	1	0	0	1	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0365	1	0	0	1	0	0	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0366	1	0	0	0	0	1	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0367	1	0	0	0	0	1	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0368	1	0	0	0	0	1	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0369	1	0	0	0	0	1	ZNF578	chr19	52448553	52521882
ZNF578_chr19_52448553_52521882	0/0	g0370	1	0	1	0	0	0	ZNF578	chr19	52448553	52521882
ZNF579_chr19_55571774_55585848	1/0	g0001	102	8	16	63	6	8	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0002	44	3	8	28	2	3	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/1	g0003	39	15	9	0	2	12	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0004	35	0	10	22	0	3	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0005	14	0	4	3	1	6	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0006	14	9	5	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0007	11	0	5	5	0	1	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0008	11	0	9	2	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0009	8	7	0	1	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0010	7	6	1	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0011	7	7	0	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0012	6	3	1	0	0	2	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0013	6	1	3	2	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0014	6	0	5	1	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0015	5	0	0	5	0	0	ZNF579	chr19	55571774	55585848