JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF579_chr19_55571774_55585848	0/0	g0066	1	0	0	1	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0067	1	0	0	0	1	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0068	1	0	0	1	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0069	1	0	0	0	0	1	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0070	1	0	0	1	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0071	1	0	0	1	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0072	1	1	0	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0073	1	0	0	1	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0074	1	1	0	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0075	1	1	0	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0076	1	1	0	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0077	1	1	0	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0078	1	1	0	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0079	1	1	0	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0080	1	1	0	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0081	1	1	0	0	0	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0082	1	0	0	0	1	0	ZNF579	chr19	55571774	55585848
ZNF579_chr19_55571774_55585848	0/0	g0083	1	0	0	0	0	1	ZNF579	chr19	55571774	55585848
ZNF57_chr19_2895928_2923473	0/0	g0001	15	0	1	11	0	3	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0002	6	0	0	5	0	1	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0003	6	0	2	3	1	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0004	5	0	1	4	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0005	5	0	0	5	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0006	4	0	1	2	0	1	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0007	4	0	0	2	0	2	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0008	4	0	0	4	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0009	4	0	1	1	1	1	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0010	4	0	0	4	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0011	4	0	1	2	0	1	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0012	4	0	2	1	0	1	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0013	3	0	0	3	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	1/0	g0014	3	0	0	0	0	2	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0015	3	0	2	1	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0016	3	0	1	1	0	1	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0017	3	0	0	2	0	1	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0018	3	1	2	0	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0019	3	3	0	0	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0020	3	0	1	1	1	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0021	3	0	0	2	0	1	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0022	3	3	0	0	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0023	2	2	0	0	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0024	2	2	0	0	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0025	2	0	0	2	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0026	2	0	0	0	0	2	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0027	2	0	0	2	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0028	2	2	0	0	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0029	2	2	0	0	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0030	2	2	0	0	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0031	2	0	2	0	0	0	ZNF57	chr19	2895928	2923473
ZNF57_chr19_2895928_2923473	0/0	g0032	2	0	0	1	0	1	ZNF57	chr19	2895928	2923473