JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF584_chr19_58403649_58423327	0/0	g0289	1	1	0	0	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0290	1	1	0	0	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0291	1	1	0	0	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0292	1	1	0	0	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0293	1	1	0	0	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0294	1	1	0	0	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0295	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0296	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0297	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0298	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0299	1	0	0	0	1	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0300	1	0	0	0	1	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0301	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0302	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0303	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0304	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0305	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0306	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0307	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0308	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0309	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0310	1	0	0	0	0	1	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0311	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0312	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0313	1	0	0	0	0	1	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0314	1	0	1	0	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0315	1	0	0	1	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/1	g0316	1	0	0	0	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0317	1	0	1	0	0	0	ZNF584	chr19	58403649	58423327
ZNF584_chr19_58403649_58423327	0/0	g0318	1	0	1	0	0	0	ZNF584	chr19	58403649	58423327
ZNF585A_chr19_37140540_37177695	0/0	g0001	22	0	5	17	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0002	20	2	4	8	3	3	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0003	13	1	2	7	0	3	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0004	9	1	1	4	1	2	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0005	9	0	5	4	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0006	7	0	0	7	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0007	7	0	0	7	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0008	6	0	2	0	0	4	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0009	5	5	0	0	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0010	5	5	0	0	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0011	5	0	4	1	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0012	4	1	0	0	2	1	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0013	4	1	2	1	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0014	4	4	0	0	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0015	3	0	2	0	0	1	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0016	3	3	0	0	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0017	3	3	0	0	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0018	3	2	1	0	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0019	3	0	3	0	0	0	ZNF585A	chr19	37140540	37177695
ZNF585A_chr19_37140540_37177695	0/0	g0020	3	3	0	0	0	0	ZNF585A	chr19	37140540	37177695