JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF595_chr4_48321_93208	0/0	g0191	1	0	1	0	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0192	1	0	0	0	0	1	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0193	1	0	0	1	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0194	1	0	0	1	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0195	1	0	0	0	0	1	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0196	1	0	0	1	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0197	1	0	0	1	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0198	1	0	0	0	0	1	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0199	1	0	0	1	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0200	1	0	0	1	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0201	1	0	0	1	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0202	1	0	0	1	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0203	1	0	1	0	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0204	1	0	1	0	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0205	1	1	0	0	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0206	1	1	0	0	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0207	1	0	0	0	0	1	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0208	1	0	0	0	0	1	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0209	1	0	1	0	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0210	1	0	0	1	0	0	ZNF595	chr4	48321	93208
ZNF595_chr4_48321_93208	0/0	g0211	1	0	0	0	0	1	ZNF595	chr4	48321	93208
ZNF596_chr8_227456_252339	1/0	g0001	50	5	12	25	5	2	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0002	33	15	0	18	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0003	26	0	6	17	1	2	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0004	21	0	4	13	0	4	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0005	19	0	5	13	1	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0006	19	4	7	6	0	2	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0007	12	0	7	0	1	4	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0008	10	0	0	8	0	2	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/1	g0009	9	0	2	4	1	1	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0010	6	0	3	0	1	2	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0011	5	0	0	5	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0012	4	0	1	3	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0013	4	3	0	1	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0014	4	0	2	0	0	2	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0015	3	3	0	0	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0016	3	0	1	0	0	2	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0017	3	0	1	2	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0018	3	0	0	3	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0019	3	0	0	3	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0020	3	3	0	0	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0021	3	0	0	3	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0022	3	0	0	3	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0023	3	0	0	2	0	1	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0024	3	2	1	0	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0025	3	0	0	3	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0026	3	0	3	0	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0027	3	0	0	3	0	0	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0028	3	0	1	0	0	2	ZNF596	chr8	227456	252339
ZNF596_chr8_227456_252339	0/0	g0029	3	0	0	0	1	2	ZNF596	chr8	227456	252339