JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF605_chr12_132913306_132961306	0/0	g0095	1	0	0	1	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0096	1	1	0	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0097	1	1	0	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0098	1	0	0	1	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0099	1	0	0	1	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0100	1	0	1	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0101	1	0	0	1	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0102	1	1	0	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0103	1	1	0	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0104	1	1	0	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0105	1	1	0	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0106	1	1	0	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0107	1	1	0	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0108	1	1	0	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0109	1	1	0	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0110	1	1	0	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0111	1	0	1	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0112	1	0	0	1	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0113	1	0	1	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0114	1	0	1	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0115	1	0	0	1	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0116	1	0	1	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0117	1	0	0	0	1	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0118	1	0	1	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0119	1	0	0	1	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0120	1	0	0	1	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0121	1	0	1	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0122	1	0	0	0	1	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0123	1	0	1	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0124	1	0	1	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0125	1	0	1	0	0	0	ZNF605	chr12	132913306	132961306
ZNF605_chr12_132913306_132961306	0/0	g0126	1	0	0	0	0	1	ZNF605	chr12	132913306	132961306
ZNF606_chr19_57972076_58007820	0/0	g0001	36	0	10	19	3	4	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0002	30	0	8	20	2	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0003	30	1	6	19	0	4	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0004	6	0	0	6	0	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0005	6	0	0	6	0	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0006	6	6	0	0	0	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0007	4	0	2	0	0	2	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0008	4	0	1	3	0	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0009	4	0	0	4	0	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0010	4	0	2	2	0	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0011	3	3	0	0	0	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0012	3	0	3	0	0	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0013	3	3	0	0	0	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0014	3	0	0	1	0	2	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0015	3	0	1	0	0	2	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0016	3	3	0	0	0	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0017	3	0	0	3	0	0	ZNF606	chr19	57972076	58007820
ZNF606_chr19_57972076_58007820	0/0	g0018	3	0	2	0	1	0	ZNF606	chr19	57972076	58007820