JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF611_chr19_52697813_52740044	0/0	g0384	1	0	0	0	1	0	ZNF611	chr19	52697813	52740044
ZNF611_chr19_52697813_52740044	0/0	g0385	1	0	1	0	0	0	ZNF611	chr19	52697813	52740044
ZNF611_chr19_52697813_52740044	0/0	g0386	1	0	1	0	0	0	ZNF611	chr19	52697813	52740044
ZNF611_chr19_52697813_52740044	0/0	g0387	1	1	0	0	0	0	ZNF611	chr19	52697813	52740044
ZNF611_chr19_52697813_52740044	0/0	g0388	1	1	0	0	0	0	ZNF611	chr19	52697813	52740044
ZNF611_chr19_52697813_52740044	0/0	g0389	1	1	0	0	0	0	ZNF611	chr19	52697813	52740044
ZNF611_chr19_52697813_52740044	0/0	g0390	1	1	0	0	0	0	ZNF611	chr19	52697813	52740044
ZNF611_chr19_52697813_52740044	0/0	g0391	1	0	0	1	0	0	ZNF611	chr19	52697813	52740044
ZNF613_chr19_51922472_51951621	0/0	g0001	33	2	8	21	0	2	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0002	26	2	6	9	4	5	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	1/0	g0003	23	0	4	13	2	3	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0004	14	0	4	10	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0005	9	0	1	5	0	3	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0006	8	0	0	8	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0007	7	0	2	1	2	2	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0008	7	0	0	7	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0009	7	7	0	0	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0010	7	0	0	7	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/1	g0011	6	0	3	1	0	1	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0012	5	0	0	4	0	1	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0013	4	0	0	4	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0014	4	0	2	0	0	2	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0015	4	0	0	4	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0016	4	4	0	0	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0017	4	4	0	0	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0018	3	0	0	2	0	1	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0019	3	0	0	0	2	1	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0020	3	0	0	3	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0021	3	0	0	3	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0022	3	0	0	0	1	2	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0023	3	0	1	2	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0024	3	0	0	3	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0025	3	3	0	0	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0026	3	3	0	0	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0027	3	0	1	0	2	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0028	2	0	0	2	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0029	2	0	0	0	0	2	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0030	2	0	0	1	0	1	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0031	2	0	0	2	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0032	2	0	1	1	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0033	2	0	0	2	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0034	2	0	0	2	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0035	2	1	0	1	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0036	2	0	1	0	0	1	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0037	2	0	0	0	0	2	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0038	2	2	0	0	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0039	2	2	0	0	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0040	2	2	0	0	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0041	2	2	0	0	0	0	ZNF613	chr19	51922472	51951621
ZNF613_chr19_51922472_51951621	0/0	g0042	2	2	0	0	0	0	ZNF613	chr19	51922472	51951621