JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF614_chr19_52008324_52033379	0/0	g0106	1	1	0	0	0	0	ZNF614	chr19	52008324	52033379
ZNF614_chr19_52008324_52033379	0/0	g0107	1	1	0	0	0	0	ZNF614	chr19	52008324	52033379
ZNF614_chr19_52008324_52033379	0/0	g0108	1	0	0	1	0	0	ZNF614	chr19	52008324	52033379
ZNF614_chr19_52008324_52033379	0/0	g0109	1	0	0	0	0	1	ZNF614	chr19	52008324	52033379
ZNF614_chr19_52008324_52033379	0/0	g0110	1	1	0	0	0	0	ZNF614	chr19	52008324	52033379
ZNF615_chr19_51986332_52013211	0/0	g0001	47	8	4	28	1	6	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0002	29	4	6	15	2	2	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0003	24	0	5	15	0	4	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0004	22	3	0	18	0	1	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0005	16	0	4	12	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0006	11	0	0	11	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0007	10	0	3	0	1	6	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0008	6	5	1	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0009	6	0	2	0	1	3	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0010	6	0	2	3	0	1	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0011	5	1	0	2	1	1	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0012	5	0	2	0	2	1	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0013	4	4	0	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0014	4	4	0	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0015	4	0	0	4	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0016	4	0	0	4	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0017	4	0	2	0	0	2	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0018	4	0	0	4	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0019	3	3	0	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0020	3	0	0	3	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0021	3	0	3	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0022	3	1	2	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0023	3	1	1	0	0	1	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0024	3	0	0	3	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0025	3	0	3	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0026	3	0	2	0	1	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0027	3	3	0	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0028	3	0	1	0	0	2	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0029	3	3	0	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0030	3	2	1	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0031	3	3	0	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0032	2	2	0	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0033	2	1	1	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0034	2	2	0	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0035	2	0	0	0	2	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0036	2	0	0	1	0	1	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0037	2	0	0	0	2	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0038	2	0	0	2	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0039	2	0	0	2	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0040	2	0	0	2	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0041	2	2	0	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0042	2	0	1	0	1	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0043	2	1	0	0	1	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0044	2	0	2	0	0	0	ZNF615	chr19	51986332	52013211
ZNF615_chr19_51986332_52013211	0/0	g0045	2	0	1	1	0	0	ZNF615	chr19	51986332	52013211