JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF618_chr9_113871309_114061593	0/0	g0249	1	0	1	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0250	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0251	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0252	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0253	1	0	1	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0254	1	0	1	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0255	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0256	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0257	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0258	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0259	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0260	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0261	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0262	1	0	1	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0263	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF618_chr9_113871309_114061593	0/0	g0264	1	1	0	0	0	0	ZNF618	chr9	113871309	114061593
ZNF619_chr3_40472122_40496053	1/0	g0001	78	7	18	35	7	10	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0002	75	2	14	47	3	9	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0003	26	1	0	21	0	4	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0004	23	16	3	2	1	1	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0005	22	0	2	15	3	2	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0006	14	1	5	7	0	1	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0007	9	7	2	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0008	8	0	0	8	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0009	6	6	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0010	5	5	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0011	5	1	0	4	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0012	5	2	2	0	1	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0013	5	5	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0014	4	0	0	4	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0015	4	0	1	3	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0016	4	0	1	1	0	2	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0017	4	0	0	4	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0018	4	0	0	4	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0019	4	4	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0020	4	4	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0021	3	1	2	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0022	3	0	0	0	0	3	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0023	3	0	0	3	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0024	3	2	1	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0025	3	3	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0026	3	0	3	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0027	3	3	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0028	3	0	0	3	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0029	3	0	0	2	0	1	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0030	2	0	1	1	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0031	2	0	0	2	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0032	2	0	0	2	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0033	2	2	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0034	2	0	0	2	0	0	ZNF619	chr3	40472122	40496053