JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF619_chr3_40472122_40496053	0/0	g0085	1	1	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0086	1	1	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0087	1	0	0	1	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0088	1	0	0	0	0	1	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0089	1	0	1	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0090	1	1	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0091	1	1	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0092	1	1	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0093	1	0	1	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0094	1	0	1	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0095	1	0	0	1	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0096	1	1	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0097	1	1	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0098	1	0	0	1	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0099	1	1	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0100	1	1	0	0	0	0	ZNF619	chr3	40472122	40496053
ZNF619_chr3_40472122_40496053	0/0	g0101	1	0	0	1	0	0	ZNF619	chr3	40472122	40496053
ZNF620_chr3_40501039_40523736	0/0	g0001	32	1	9	17	1	4	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0002	29	4	7	13	0	5	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0003	18	0	0	14	0	4	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0004	13	0	1	12	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0005	13	0	0	12	0	1	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0006	9	0	4	4	0	1	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0007	8	0	0	8	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0008	7	7	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0009	6	6	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0010	6	0	3	3	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0011	5	0	1	4	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0012	5	0	0	3	0	2	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0013	5	0	3	2	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0014	5	4	1	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0015	4	4	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0016	4	0	2	1	1	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0017	4	0	0	4	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0018	4	0	0	3	0	1	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0019	4	0	0	4	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0020	3	0	0	3	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0021	3	1	1	0	0	1	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0022	3	0	2	0	1	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0023	3	0	1	2	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0024	3	0	2	1	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0025	3	3	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0026	3	0	0	0	0	3	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0027	3	3	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0028	2	2	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0029	2	2	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0030	2	0	0	0	1	1	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0031	2	0	1	0	1	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0032	2	0	0	2	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0033	2	0	0	2	0	0	ZNF620	chr3	40501039	40523736