JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF620_chr3_40501039_40523736	0/0	g0184	1	0	0	1	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0185	1	1	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0186	1	0	0	1	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0187	1	0	1	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0188	1	0	0	1	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0189	1	1	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0190	1	0	0	1	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0191	1	0	0	1	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0192	1	1	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0193	1	1	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0194	1	0	1	0	0	0	ZNF620	chr3	40501039	40523736
ZNF620_chr3_40501039_40523736	0/0	g0195	1	1	0	0	0	0	ZNF620	chr3	40501039	40523736
ZNF621_chr3_40519960_40544782	0/1	g0001	92	10	20	45	3	13	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	1/0	g0002	73	2	18	38	6	8	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0003	41	12	4	21	0	4	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0004	23	2	1	18	0	2	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0005	18	0	6	11	0	1	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0006	17	17	0	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0007	16	13	3	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0008	15	0	2	9	1	3	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0009	9	7	2	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0010	5	1	1	0	1	2	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0011	5	5	0	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0012	5	0	0	5	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0013	5	3	0	0	1	1	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0014	4	0	0	0	4	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0015	3	3	0	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0016	3	0	3	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0017	3	0	0	2	0	1	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0018	3	0	0	3	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0019	3	3	0	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0020	3	1	2	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0021	2	0	0	2	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0022	2	0	0	0	0	2	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0023	2	0	0	2	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0024	2	0	0	2	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0025	2	0	0	2	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0026	2	2	0	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0027	2	1	1	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0028	2	0	2	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0029	2	0	0	2	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0030	2	0	2	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0031	2	0	0	2	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0032	2	2	0	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0033	2	2	0	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0034	1	0	1	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0035	1	1	0	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0036	1	0	0	1	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0037	1	0	1	0	0	0	ZNF621	chr3	40519960	40544782
ZNF621_chr3_40519960_40544782	0/0	g0038	1	0	0	1	0	0	ZNF621	chr3	40519960	40544782