JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF622_chr5_16446519_16470800	0/0	g0126	1	0	0	1	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0127	1	0	0	1	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0128	1	0	0	1	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0129	1	0	0	1	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0130	1	0	0	1	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0131	1	0	0	1	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0132	1	1	0	0	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0133	1	1	0	0	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0134	1	1	0	0	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0135	1	0	0	1	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0136	1	1	0	0	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0137	1	1	0	0	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0138	1	1	0	0	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0139	1	0	1	0	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0140	1	1	0	0	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0141	1	1	0	0	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0142	1	0	1	0	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0143	1	0	0	1	0	0	ZNF622	chr5	16446519	16470800
ZNF622_chr5_16446519_16470800	0/0	g0144	1	1	0	0	0	0	ZNF622	chr5	16446519	16470800
ZNF623_chr8_143631019_143658730	0/0	g0001	47	11	9	21	1	5	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0002	44	4	18	14	2	6	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0003	19	0	3	15	0	1	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0004	13	0	6	5	1	1	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0005	8	8	0	0	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0006	7	7	0	0	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0007	7	6	1	0	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0008	6	0	1	4	1	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0009	6	0	0	6	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0010	6	0	0	5	1	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0011	5	0	3	0	1	1	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0012	5	5	0	0	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0013	5	0	0	5	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0014	4	0	0	4	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0015	4	0	1	1	1	1	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0016	4	0	2	1	0	1	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0017	4	0	1	2	0	1	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0018	3	0	0	0	1	2	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0019	3	0	0	3	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0020	3	0	3	0	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0021	3	0	0	3	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0022	3	2	0	1	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0023	3	0	1	2	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0024	3	1	0	2	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0025	2	0	0	2	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0026	2	0	1	0	0	1	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0027	2	0	0	1	1	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0028	2	0	0	2	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0029	2	0	0	2	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0030	2	2	0	0	0	0	ZNF623	chr8	143631019	143658730
ZNF623_chr8_143631019_143658730	0/0	g0031	2	1	0	0	0	1	ZNF623	chr8	143631019	143658730