JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF638_chr2_71326782_71440061	0/0	g0316	1	0	0	0	1	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0317	1	0	0	1	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0318	1	0	0	1	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0319	1	0	0	1	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0320	1	0	0	1	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0321	1	0	0	1	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0322	1	0	0	1	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0323	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0324	1	0	0	0	1	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0325	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0326	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0327	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0328	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0329	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0330	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0331	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0332	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0333	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0334	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0335	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0336	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0337	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0338	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0339	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0340	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0341	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0342	1	1	0	0	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0343	1	0	0	1	0	0	ZNF638	chr2	71326782	71440061
ZNF638_chr2_71326782_71440061	0/0	g0344	1	0	0	1	0	0	ZNF638	chr2	71326782	71440061
ZNF639_chr3_179318031_179343583	0/0	g0001	72	2	15	46	3	6	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	1/1	g0002	52	17	10	16	3	4	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0003	30	10	3	16	0	1	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0004	20	1	5	9	1	4	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0005	17	0	0	16	0	1	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0006	14	1	4	9	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0007	8	1	3	0	2	2	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0008	8	0	6	0	0	2	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0009	8	0	0	4	0	4	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0010	8	0	4	3	0	1	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0011	7	5	2	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0012	6	0	2	3	0	1	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0013	6	4	2	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0014	6	0	0	6	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0015	5	0	0	1	0	4	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0016	5	5	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0017	5	1	1	0	0	3	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0018	4	4	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0019	4	0	2	2	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0020	4	3	1	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0021	4	0	0	4	0	0	ZNF639	chr3	179318031	179343583