JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF639_chr3_179318031_179343583	0/0	g0072	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0073	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0074	1	0	0	0	0	1	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0075	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0076	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0077	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0078	1	0	0	0	1	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0079	1	0	1	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0080	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0081	1	0	1	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0082	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0083	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0084	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0085	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0086	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0087	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0088	1	0	1	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0089	1	0	1	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0090	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0091	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0092	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0093	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0094	1	0	0	0	0	1	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0095	1	0	1	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0096	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0097	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0098	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0099	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0100	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0101	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0102	1	0	0	0	1	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0103	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0104	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0105	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0106	1	0	1	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0107	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0108	1	0	0	0	0	1	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0109	1	1	0	0	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0110	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF639_chr3_179318031_179343583	0/0	g0111	1	0	0	1	0	0	ZNF639	chr3	179318031	179343583
ZNF641_chr12_48332180_48355919	1/0	g0001	94	10	17	57	1	8	ZNF641	chr12	48332180	48355919
ZNF641_chr12_48332180_48355919	0/0	g0002	50	18	9	11	6	6	ZNF641	chr12	48332180	48355919
ZNF641_chr12_48332180_48355919	0/0	g0003	47	1	13	24	2	7	ZNF641	chr12	48332180	48355919
ZNF641_chr12_48332180_48355919	0/0	g0004	24	1	12	0	2	9	ZNF641	chr12	48332180	48355919
ZNF641_chr12_48332180_48355919	0/0	g0005	20	0	0	20	0	0	ZNF641	chr12	48332180	48355919
ZNF641_chr12_48332180_48355919	0/0	g0006	19	0	3	16	0	0	ZNF641	chr12	48332180	48355919
ZNF641_chr12_48332180_48355919	0/0	g0007	15	0	0	15	0	0	ZNF641	chr12	48332180	48355919
ZNF641_chr12_48332180_48355919	0/0	g0008	7	0	7	0	0	0	ZNF641	chr12	48332180	48355919
ZNF641_chr12_48332180_48355919	0/0	g0009	7	7	0	0	0	0	ZNF641	chr12	48332180	48355919
ZNF641_chr12_48332180_48355919	0/1	g0010	6	0	0	2	1	2	ZNF641	chr12	48332180	48355919