JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF652_chr17_49284206_49367250	0/0	g0351	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0352	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0353	1	0	0	0	0	1	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0354	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0355	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0356	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0357	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0358	1	0	1	0	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0359	1	0	0	0	0	1	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0360	1	0	0	0	0	1	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0361	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0362	1	0	0	0	1	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0363	1	1	0	0	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0364	1	1	0	0	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0365	1	0	0	0	0	1	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0366	1	0	0	0	0	1	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0367	1	0	0	0	1	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0368	1	0	1	0	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0369	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0370	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0371	1	0	0	0	0	1	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0372	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0373	1	0	0	0	1	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0374	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0375	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0376	1	0	0	0	0	1	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0377	1	0	1	0	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0378	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0379	1	0	0	0	1	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0380	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF652_chr17_49284206_49367250	0/0	g0381	1	0	0	1	0	0	ZNF652	chr17	49284206	49367250
ZNF653_chr19_11478429_11510839	1/0	g0001	16	2	3	9	0	1	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0002	12	2	9	1	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0003	12	1	1	8	0	2	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0004	11	0	2	6	1	2	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0005	10	0	3	1	2	4	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0006	9	0	8	1	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0007	8	7	1	0	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0008	7	0	3	1	1	2	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0009	6	3	1	0	2	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0010	5	5	0	0	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0011	4	0	0	4	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0012	4	4	0	0	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0013	4	0	0	4	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0014	3	3	0	0	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0015	3	3	0	0	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0016	3	0	0	3	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0017	3	0	0	3	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0018	3	0	0	3	0	0	ZNF653	chr19	11478429	11510839
ZNF653_chr19_11478429_11510839	0/0	g0019	3	0	0	3	0	0	ZNF653	chr19	11478429	11510839