JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
BTNL8_chr5_180894159_180955906	0/0	g0144	1	0	0	1	0	0	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0145	1	1	0	0	0	0	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0146	1	1	0	0	0	0	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0147	1	1	0	0	0	0	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0148	1	1	0	0	0	0	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0149	1	0	0	0	0	1	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0150	1	0	0	0	0	1	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0151	1	0	0	0	0	1	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0152	1	0	0	1	0	0	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0153	1	0	1	0	0	0	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0154	1	0	0	0	1	0	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0155	1	0	0	0	0	1	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0156	1	0	0	0	0	1	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0157	1	0	0	0	0	1	BTNL8	chr5	180894159	180955906
BTNL8_chr5_180894159_180955906	0/0	g0158	1	0	0	0	0	1	BTNL8	chr5	180894159	180955906
BTNL9_chr5_181035266_181066521	0/0	g0001	14	3	7	3	0	1	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0002	12	0	3	8	1	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0003	9	0	0	8	0	1	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0004	7	1	0	6	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0005	6	0	6	0	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0006	5	0	0	4	1	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0007	5	1	3	0	0	1	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0008	5	0	3	0	1	1	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0009	4	4	0	0	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0010	4	4	0	0	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0011	4	0	4	0	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0012	3	0	0	3	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0013	3	0	2	0	1	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0014	3	0	3	0	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0015	3	0	0	3	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0016	3	1	1	0	1	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0017	3	0	0	3	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0018	3	0	3	0	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0019	2	0	0	2	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0020	2	0	0	2	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0021	2	0	0	2	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0022	2	0	0	2	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0023	2	0	1	0	1	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0024	2	0	1	1	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0025	2	0	0	2	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0026	2	0	0	2	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0027	2	0	0	2	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0028	2	0	1	0	1	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0029	2	2	0	0	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0030	2	2	0	0	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0031	2	0	0	2	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0032	2	2	0	0	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0033	2	0	0	0	2	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0034	2	0	0	2	0	0	BTNL9	chr5	181035266	181066521
BTNL9_chr5_181035266_181066521	0/0	g0035	2	0	1	0	0	1	BTNL9	chr5	181035266	181066521