JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF665_chr19_53157424_53198358	0/0	g0346	1	1	0	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0347	1	1	0	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0348	1	1	0	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0349	1	0	0	1	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0350	1	0	0	1	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0351	1	0	0	1	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0352	1	0	0	1	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0353	1	0	0	1	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0354	1	0	1	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0355	1	0	1	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0356	1	0	1	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0357	1	0	1	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0358	1	0	1	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0359	1	0	1	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0360	1	0	0	0	0	1	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0361	1	0	1	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0362	1	0	0	0	1	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0363	1	0	1	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0364	1	0	0	0	1	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0365	1	1	0	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0366	1	1	0	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0367	1	0	0	0	0	1	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0368	1	0	1	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0369	1	0	1	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0370	1	0	1	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0371	1	1	0	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0372	1	1	0	0	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0373	1	0	0	1	0	0	ZNF665	chr19	53157424	53198358
ZNF665_chr19_53157424_53198358	0/0	g0374	1	0	0	1	0	0	ZNF665	chr19	53157424	53198358
ZNF667_chr19_56434329_56482345	0/0	g0001	13	0	7	1	1	4	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0002	9	1	2	4	1	1	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0003	8	0	0	8	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0004	7	0	1	6	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0005	7	0	2	4	0	1	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0006	6	3	0	3	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0007	5	0	1	3	0	1	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0008	4	0	0	4	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0009	4	0	2	2	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0010	4	0	0	2	0	2	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0011	4	3	1	0	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0012	3	0	1	2	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0013	3	0	0	3	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0014	3	0	0	3	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0015	3	3	0	0	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0016	3	0	1	0	0	2	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0017	3	0	3	0	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0018	3	0	0	2	1	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0019	3	0	3	0	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0020	3	0	0	3	0	0	ZNF667	chr19	56434329	56482345
ZNF667_chr19_56434329_56482345	0/0	g0021	3	0	3	0	0	0	ZNF667	chr19	56434329	56482345