JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF676_chr19_22174089_22201951	0/0	g0252	1	0	0	1	0	0	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0253	1	0	0	1	0	0	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0254	1	0	0	1	0	0	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0255	1	0	0	1	0	0	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0256	1	0	0	0	0	1	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0257	1	0	1	0	0	0	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0258	1	0	0	1	0	0	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0259	1	0	0	1	0	0	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0260	1	0	0	1	0	0	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0261	1	1	0	0	0	0	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0262	1	0	0	1	0	0	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0263	1	0	0	0	1	0	ZNF676	chr19	22174089	22201951
ZNF676_chr19_22174089_22201951	0/0	g0264	1	1	0	0	0	0	ZNF676	chr19	22174089	22201951
ZNF677_chr19_53230381_53259873	0/0	g0001	30	0	0	24	0	6	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	1/0	g0002	30	1	4	21	0	3	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/1	g0003	24	0	6	14	1	2	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0004	14	7	2	4	1	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0005	14	0	1	13	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0006	13	0	0	13	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0007	10	10	0	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0008	9	8	1	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0009	9	2	5	0	0	2	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0010	7	0	0	5	0	2	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0011	6	0	0	5	0	1	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0012	5	0	4	0	1	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0013	5	0	3	1	0	1	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0014	5	2	3	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0015	5	0	2	0	3	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0016	4	1	0	0	2	1	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0017	4	2	2	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0018	4	0	0	2	0	2	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0019	4	0	0	4	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0020	4	0	0	4	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0021	3	2	1	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0022	3	3	0	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0023	3	3	0	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0024	3	3	0	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0025	3	0	2	0	0	1	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0026	3	0	0	0	1	2	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0027	3	0	0	0	2	1	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0028	3	3	0	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0029	3	0	3	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0030	3	0	0	3	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0031	3	3	0	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0032	3	0	0	3	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0033	2	2	0	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0034	2	2	0	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0035	2	0	2	0	0	0	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0036	2	0	1	0	0	1	ZNF677	chr19	53230381	53259873
ZNF677_chr19_53230381_53259873	0/0	g0037	2	0	0	2	0	0	ZNF677	chr19	53230381	53259873