JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF684_chr1_40526637_40553167	0/0	g0130	1	0	0	1	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0131	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0132	1	0	0	1	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0133	1	0	0	1	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0134	1	0	0	0	0	1	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0135	1	0	1	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0136	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0137	1	0	0	0	0	1	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0138	1	0	0	1	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0139	1	0	0	1	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0140	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0141	1	0	0	0	0	1	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0142	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0143	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0144	1	0	0	0	0	1	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0145	1	0	0	1	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0146	1	0	0	1	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0147	1	0	1	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0148	1	0	0	1	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0149	1	0	1	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0150	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0151	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0152	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0153	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0154	1	0	0	0	0	1	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0155	1	0	0	0	1	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0156	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0157	1	0	1	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0158	1	0	1	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0159	1	0	0	0	0	1	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0160	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0161	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0162	1	0	0	0	0	1	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0163	1	0	0	1	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0164	1	0	0	1	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0165	1	0	0	0	0	1	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0166	1	0	1	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0167	1	0	1	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0168	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0169	1	0	1	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0170	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0171	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0172	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0173	1	0	0	0	0	1	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0174	1	1	0	0	0	0	ZNF684	chr1	40526637	40553167
ZNF684_chr1_40526637_40553167	0/0	g0175	1	0	0	1	0	0	ZNF684	chr1	40526637	40553167
ZNF687_chr1_151277299_151297176	0/1	g0001	128	33	24	48	7	15	ZNF687	chr1	151277299	151297176
ZNF687_chr1_151277299_151297176	1/0	g0002	110	13	25	55	4	12	ZNF687	chr1	151277299	151297176
ZNF687_chr1_151277299_151297176	0/0	g0003	19	7	3	9	0	0	ZNF687	chr1	151277299	151297176
ZNF687_chr1_151277299_151297176	0/0	g0004	14	6	2	6	0	0	ZNF687	chr1	151277299	151297176