JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF695_chr1_246980323_247013057	0/0	g0149	1	0	1	0	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0150	1	0	0	1	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0151	1	0	0	1	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0152	1	1	0	0	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0153	1	0	0	1	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0154	1	0	0	0	0	1	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0155	1	0	0	0	0	1	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0156	1	1	0	0	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0157	1	0	1	0	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0158	1	0	0	0	1	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0159	1	1	0	0	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0160	1	0	0	1	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0161	1	0	0	1	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0162	1	0	0	0	0	1	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0163	1	0	0	1	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0164	1	0	0	1	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0165	1	0	0	1	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0166	1	0	0	1	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0167	1	0	0	0	1	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0168	1	0	0	0	0	1	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0169	1	1	0	0	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0170	1	1	0	0	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0171	1	0	0	1	0	0	ZNF695	chr1	246980323	247013057
ZNF695_chr1_246980323_247013057	0/0	g0172	1	0	0	1	0	0	ZNF695	chr1	246980323	247013057
ZNF696_chr8_143286417_143304952	0/0	g0001	175	2	31	116	8	18	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0002	33	2	9	11	3	8	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0003	32	29	3	0	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	1/0	g0004	32	3	5	19	1	3	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0005	19	0	3	14	0	2	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/1	g0006	14	1	10	1	0	1	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0007	10	10	0	0	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0008	9	0	5	2	0	2	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0009	7	7	0	0	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0010	7	2	1	3	0	1	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0011	5	5	0	0	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0012	5	5	0	0	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0013	5	0	0	5	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0014	4	4	0	0	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0015	4	0	0	4	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0016	4	0	4	0	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0017	4	0	0	4	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0018	3	3	0	0	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0019	3	0	1	1	0	1	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0020	3	1	2	0	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0021	3	0	2	0	0	1	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0022	3	3	0	0	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0023	2	2	0	0	0	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0024	2	0	1	0	1	0	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0025	2	0	0	0	0	2	ZNF696	chr8	143286417	143304952
ZNF696_chr8_143286417_143304952	0/0	g0026	2	1	1	0	0	0	ZNF696	chr8	143286417	143304952