JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF709_chr19_12456184_12489816	0/0	g0193	1	0	1	0	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0194	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0195	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0196	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0197	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0198	1	0	0	0	0	1	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0199	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0200	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0201	1	0	0	0	0	1	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0202	1	0	0	0	0	1	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0203	1	1	0	0	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0204	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0205	1	0	1	0	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0206	1	0	0	0	0	1	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0207	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0208	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0209	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0210	1	0	0	0	1	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0211	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0212	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0213	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0214	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0215	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0216	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0217	1	1	0	0	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0218	1	1	0	0	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0219	1	1	0	0	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0220	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0221	1	0	0	1	0	0	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	g0222	1	0	1	0	0	0	ZNF709	chr19	12456184	12489816
ZNF70_chr22_23733682_23756112	0/0	g0001	12	2	4	1	3	2	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0002	12	0	1	7	1	3	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	1/0	g0003	12	1	4	3	1	2	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0004	12	0	1	10	1	0	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0005	10	2	5	1	0	2	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0006	9	0	2	4	0	3	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0007	7	0	1	5	0	1	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0008	6	0	1	4	0	1	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0009	6	0	1	5	0	0	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0010	5	5	0	0	0	0	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0011	5	0	1	2	0	2	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0012	5	0	1	4	0	0	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0013	5	0	0	5	0	0	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0014	5	0	3	2	0	0	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0015	4	0	0	1	1	2	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0016	4	0	2	0	1	1	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0017	3	0	0	3	0	0	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0018	3	3	0	0	0	0	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0019	3	3	0	0	0	0	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	g0020	3	0	1	2	0	0	ZNF70	chr22	23733682	23756112